Phylogenetics
K-DenseCommunityCreated by Kuan-lin HuangDistributed by K-Dense
- Skill
- Workflow
- Science and research
- Link-only
- Low risk
- Has scripts
Install
Get the skill from its source (we cannot redistribute it):
https://github.com/K-Dense-AI/scientific-agent-skills/tree/a25cf9ec00e2745d03f8704acf6f6919694ccd9a/skills/phylogenetics
Documentation by Kuan-lin Huang
The licence of this skill does not allow us to copy its documentation. Read it at the source
Files
- SKILL.md(opens on GitHub)Not mirrored: opens on GitHub9.2 KiB
- references/iqtree_inference.md(opens on GitHub)Not mirrored: opens on GitHub7.2 KiB
- scripts/phylogenetic_analysis.py(opens on GitHub)ScriptNot mirrored: opens on GitHub12.7 KiB
Requirements and compatibility
Works with: Claude Code, Claude apps, OpenAI Codex, GitHub Copilot, Cursor, Gemini CLI, Kiro, OpenCode, Goose, Amp, Roo Code, JetBrains Junie, Factory Droid, Devin (ex-Windsurf), Mistral Vibe, OpenHands, Letta
“Works with” means the tool reads the open Agent Skills format; a skill written for one tool may use features others lack.
Needs: Needs Python
The author says: Requires MAFFT and IQ-TREE 3 or FastTree executables. Optional tree summaries use Python 3.12 and ete3 3.1.3; rendering also needs PyQt5. Optional trimming needs trimAl. Network access is required for installation, not local inference.
Security
What our scanner noticed· Low risk
- Instructions that use the network
- Scripts that your agent may run
This skill includes scripts that your agent may run. Read them before you use it.
A static scan is not a guarantee. Skills are third-party content: review a skill before you let an agent use it.
Attribution and licence
- Created by
- Kuan-lin Huang
- Publisher
- K-Dense (Community)
- Distributed by
- K-Dense
- Source
- K-Dense-AI/scientific-agent-skills · skills/phylogenetics · commit a25cf9e
- Licence
- Unrecognised licence declaration: Unknown (link-only: we do not redistribute its files)
- Synced
AutoGineer is not affiliated with or endorsed by Kuan-lin Huang or K-Dense.
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Get it from the source
This skill’s licence does not allow redistribution, so we link to it instead: K-Dense-AI/scientific-agent-skills