Trusted skills for AI agents from official vendors and established maintainers. Every skill is attributed to its author, scanned, and comes with install steps for your AI tool.
378 skills
K-Dense· Community
A Pythonic wrapper for RDKit simplifying molecular cheminformatics tasks like standardization, fingerprinting, and 3D conformer generation.
K-Dense· Community
Provides Rust, Python, and CLI interfaces for genomic interval processing, set algebra, and signal track generation.
K-Dense· Community
Manage biological datasets, metadata, and lineage using LaminDB for reproducible research.
K-Dense· Community
A structured framework for autonomous research optimization using Hypothesis Tree Refinement to manage experiments and accumulate insights.
K-Dense· Community
A Python client for programmatically managing Zotero reference libraries, collections, and attachments via Web and local APIs.
K-Dense· Community
Parametric CAD for laboratory hardware with automated interface verification and fabrication artifact generation.
K-Dense· Community
Generate academic research posters using LaTeX templates and automated preflight tools.
K-Dense· Community
Rowan is a cloud-native molecular modeling and medicinal-chemistry workflow platform with a Python API. Use for pKa and macropKa prediction, conformer and tautomer ensembles, docking and analogue docking, protein-ligand cofolding, MSA generation, molecular dynamics, permeability, descriptor workflows, and related small-molecule or protein modeling tasks. Ideal for programmatic batch screening, multi-step chemistry pipelines, and workflows that would otherwise require maintaining local HPC/GPU infrastructure.
K-Dense· Community
A workflow for calculating seawater carbonate chemistry, mineral saturation, and uncertainty propagation using PyCO2SYS.
K-Dense· Community
Query the NCATS ARAX biomedical knowledge graph API for bounded, provenance-rich relationship lookups.
K-Dense· Community
A local-only workflow for preparing structured, evidence-based peer review drafts for scientific manuscripts.
K-Dense· Community
Analyzes and engineers protein glycosylation by scanning canonical N-glycosylation sequons, describing S/T-rich regions, checking curated glycan evidence, and preparing NetNGlyc, NetOGlyc and GlycoSHIELD workflows. Use for glycoprotein engineering, antibody Fc glycosylation, glycan shielding, and site-specific glycoproteomics interpretation.
K-Dense· Community
Automates reproducible CellProfiler microscopy pipelines for nuclear segmentation, cell counting, and fluorescence measurement.
K-Dense· Community
Interface for searching and reading biomedical literature, regulatory documents, and clinical trial data via the GXL Paperclip CLI and SDK.
K-Dense· Community
Analyze flow cytometry data and reproduce FlowJo workspaces using the FlowKit Python library.
K-Dense· Community
A comprehensive workflow for designing, auditing, and validating PCR and RT-qPCR primer pairs using local tools.
K-Dense· Community
Builds and validates clinical machine-learning pipelines for EHR, signals, and medical imaging using PyHealth 2.0.2.
K-Dense· Community
Simulate lithium-ion battery experiments using PyBaMM with automated numerical validation and parameter provenance.
K-Dense· Community
A systematic framework for conducting, documenting, and reporting academic literature reviews.
K-Dense· Community
Build, manage, and execute reproducible genomics workloads on the DNAnexus platform using the dx CLI, SDK, and workflow tools.
K-Dense· Community
Build, diagnose, and compare Bayesian probabilistic models using PyMC, PyTensor, and ArviZ.
Edward Cheng-I Wu· Community
Multi-perspective academic paper review with dynamic reviewer personas. Runs a 5-seat, role-separated review panel (Journal-Fit Reviewer + 3 peer-review roles + Devil's Advocate) with field-specific expertise; role separation is not a claim of independent error processes. Supports full review, re-review (verification), quick assessment, methodology focus, Socratic guided, and calibration modes. Triggers on: review paper, peer review, manuscript review, referee report, review my paper, critique paper, simulate review, editorial review, calibrate reviewer, reviewer calibration, measure reviewer accuracy, 審查論文, 論文審查, 模擬審查, 同儕審查, 幫我審這篇, 以審查人角度評估, 審查者校準, 논문 심사, 동료 심사, 모의 심사, 심사자 관점에서 평가, 심사자 보정, revisar artículo, revisión entre pares, revisión de manuscrito, informe de árbitro, revisa mi artículo, criticar artículo, simular revisión, revisión editorial, calibrar revisor.
Edward Cheng-I Wu· Community
12-agent academic paper writing pipeline. 11 modes (full/plan/outline/revision/revision-coach/abstract/lit-review/format-convert/citation-check/disclosure/rebuttal-audit). 6 paper types, 5 citation formats, bilingual abstracts, LaTeX/DOCX-via-Pandoc/PDF output. Style Calibration + Writing Quality Check + Anti-Patterns with IRON RULE markers. Triggers: write paper, academic paper, guide my paper, parse reviews, I got reviewer comments, revision roadmap, should we push back, conference rebuttal, grant panel response, audit my rebuttal, check my response draft, AI disclosure, check citations, citation check, check my references, verify references, look over the refs, 寫論文, 學術論文, 引導我寫論文, 審查意見, 我收到審查意見, 修訂路線圖, 評估回覆, 檢查引用, 引用檢查, 檢查參考文獻, 核對文獻, 논문 작성, 초록 작성, 논문 수정, 논문 계획을 도와줘, 심사 의견을 받았어, 심사 의견 반영, 답변서 점검, AI 사용 고지, 인용 확인, 인용 형식 검사, enmendar mi artículo, redactar artículo, guía mi artículo, analizar reseñas, auditar mi respuesta, verificar borrador de respuesta, verificar citas, divulgación de IA.
Edward Cheng-I Wu· Community
Protocol-driven study screening for systematic, scoping and rapid reviews. Turns a proposal or PROSPERO protocol into confirmed eligibility rules, then screens titles/abstracts and full texts with two blinded AI reviewers and a third-reviewer adjudicator: ordered exclusion codes, no silent defaults, resumable batch runs, QC (seed studies, near-miss rechecks, kappa and PABAK), PRISMA 2020 counts, EndNote/Zotero RIS groups, an Excel log, a methods draft and a literature_corpus handoff to academic-paper. Reads RIS, PubMed .nbib, Web of Science and CSV exports; removes duplicates. 8 modes: protocol, quick, pilot, ta-screen, ft-screen, adjudicate, audit, report. Use it to screen records against eligibility criteria, pilot screening, resolve screening conflicts, audit exclusions or report the selection process. Triggers on: screen these papers, title/abstract screening, full-text screening, screening conflicts, inclusion criteria, PRISMA flow, غربالگری مقالات, اسکرینینگ عنوان و چکیده, معیارهای ورود و خروج.