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Agent Skills

Trusted skills for AI agents from official vendors and established maintainers. Every skill is attributed to its author, scanned, and comes with install steps for your AI tool.

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378 skills

  • Academic Pipeline

    Edward Cheng-I Wu· Community

    Orchestrator for the full academic research pipeline: research -> write -> integrity check -> review -> revise -> re-review -> re-revise -> final integrity check -> finalize. Coordinates deep-research, academic-paper, and academic-paper-reviewer into a seamless 10-stage workflow with mandatory, coverage-bounded integrity checks, two-stage peer review, and auditable quality-assurance artifacts. Triggers on: academic pipeline, research to paper, full paper workflow, paper pipeline, end-to-end paper, research-to-publication, complete paper workflow, 연구부터 논문까지, 연구 주제 설정부터 논문 완성까지, 논문 전체 워크플로, flujo de trabajo académico, investigación a artículo, flujo completo de artículo, pipeline de investigación completa, publicación de investigación, flujo de trabajo completo del artículo.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyGitHub stars of the source repository55.7k

  • Deep Research

    Edward Cheng-I Wu· Community

    Universal deep research agent team. 13-agent pipeline for rigorous academic research on any topic. 8 modes: full research, quick brief, paper review, lit-review, fact-check, three-way literature scan, Socratic guided research dialogue, and systematic review with optional meta-analysis. Covers research question formulation, Socratic mentoring, methodology design, systematic literature search, source verification, cross-source synthesis, risk of bias assessment, meta-analysis, APA 7.0 report compilation, editorial review, devil's advocate challenges, ethics review, and post-research literature monitoring. Triggers on: research, deep research, literature review, systematic review, meta-analysis, PRISMA, evidence synthesis, fact-check, WHY HOW WHAT papers, 3W literature scan, guide my research, help me think through, 研究, 深度研究, 文獻回顧, 文獻探討, 系統性回顧, 後設分析, 事實查核, 三段式文獻掃描, 引導我的研究, 幫我釐清, 幫我想想, 我不確定要研究什麼, 研究方向, 研究主題, 심층 연구, 문헌 조사, 체계적 문헌고찰, 메타분석, 사실 확인, 연구 방향을 잡아줘, 연구 주제 정하는 것을 도와줘, revisión de literatura, metaanálisis

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyMedium riskGitHub stars of the source repository55.7k

  • Solo

    AnthropicOfficial

    A structured workflow for solving complex mathematical problems through iterative reasoning and persistent documentation.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Apache-2.0GitHub stars of the source repository46.3k

  • Math Olympiad

    AnthropicOfficial

    A rigorous, adversarial workflow for solving and verifying high-level competition math problems like IMO and Putnam.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Apache-2.0Low riskHas scriptsGitHub stars of the source repository46.3k

  • Siege

    AnthropicOfficial

    A structured, multi-round protocol for solving complex mathematical problems using autonomous judge and worker agents.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Apache-2.0Low riskHas scriptsGitHub stars of the source repository46.3k

  • Search Specialist

    Seth Hobson· Community

    An expert research agent that employs advanced search operators, multi-source verification, and synthesis to deliver actionable insights.

    Science and researchClaude Code
    MITGitHub stars of the source repository42.3k

  • Research Harness Engineer

    GitHubOfficial

    An expert research engineer persona focused on building rigorous, fraud-resistant evaluation harnesses for experimental campaigns.

    Science and researchGitHub Copilot
    MITGitHub stars of the source repository40.9k

  • Scientific Paper Research

    GitHubOfficial

    A research agent specialized in searching scientific literature and extracting structured experimental data for evidence-based analysis.

    Science and researchGitHub Copilot
    MITGitHub stars of the source repository40.9k

  • Single Cell Rna Qc

    AnthropicOfficial

    Automated quality control workflow for single-cell RNA-seq data using scverse best practices.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Apache-2.0Low riskHas scriptsGitHub stars of the source repository35.1k

  • Nextflow Development

    AnthropicOfficial

    Automate the execution of nf-core bioinformatics pipelines for RNA-seq, WGS/WES, and ATAC-seq analysis.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Apache-2.0Medium riskHas scriptsGitHub stars of the source repository35.1k

  • Start

    AnthropicOfficial

    An onboarding workflow to initialize the bio-research environment and audit available tools and analysis capabilities.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Apache-2.0GitHub stars of the source repository35.1k

  • Scientific Problem Selection

    AnthropicOfficial

    A systematic framework for scientists to select, evaluate, and troubleshoot research projects based on decision-tree principles.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Apache-2.0GitHub stars of the source repository35.1k

  • Persona Researcher

    Google WorkspaceOfficial

    An AI persona designed to streamline research organization, data logging, and collaborative workflows.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Apache-2.0GitHub stars of the source repository32.2k

  • Ngs Bcl To Fastq

    OpenAIOfficial

    Validate Illumina BCL run folders and sample sheets, plan demultiplexing, review index/UMI/lane choices, run BCL-to-FASTQ conversion, and interpret demux metrics while surfacing license/download boundaries.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyGitHub stars of the source repository7.8k

  • Pharmgkb Skill

    OpenAIOfficial

    Submit compact PharmGKB API requests for genes, variants, clinical annotations, dosing guidelines, and search. Use when a user wants concise PharmGKB summaries

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyLow riskHas scriptsGitHub stars of the source repository7.8k

  • Boltz Small Molecule Design

    OpenAIOfficial

    Generate novel small-molecule binders for protein targets using the Boltz platform.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    MITGitHub stars of the source repository7.8k

  • Ngs Bulk Rnaseq

    OpenAIOfficial

    Dispatch bulk RNA-seq requests to FASTQ-to-count QC or count-matrix differential-expression skills using nf-core/rnaseq, STAR, Salmon, featureCounts, MultiQC, and R/Bioconductor workflows.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyGitHub stars of the source repository7.8k

  • Mgnify Skill

    OpenAIOfficial

    Submit compact MGnify API requests for microbiome studies, samples, and biome metadata. Use when a user wants concise MGnify summaries

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyLow riskHas scriptsGitHub stars of the source repository7.8k

  • Bindingdb Skill

    OpenAIOfficial

    Submit compact BindingDB REST API requests for ligand-target binding lookups by PDB, UniProt, or similarity search. Use when a user wants concise BindingDB summaries; save raw payloads only on request.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyLow riskHas scriptsGitHub stars of the source repository7.8k

  • Ngs Bulk Rnaseq Differential Expression

    OpenAIOfficial

    Run or plan bulk RNA-seq differential-expression analysis from count matrices with replicate, design formula, contrast, batch, normalization, QC plot, and result-table checks.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyGitHub stars of the source repository7.8k

  • Encode Skill

    OpenAIOfficial

    Submit compact ENCODE REST API requests for object lookups, portal-style search, and metadata retrieval. Use when a user wants concise ENCODE summaries

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyLow riskHas scriptsGitHub stars of the source repository7.8k

  • Genebass Gene Burden Skill

    OpenAIOfficial

    Submit compact Genebass gene burden requests for one Ensembl gene ID and one burden set. Use when a user wants concise Genebass PheWAS summaries

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyLow riskHas scriptsGitHub stars of the source repository7.8k

  • Rhea Skill

    OpenAIOfficial

    Submit compact Rhea reaction search requests for biochemical reactions and reaction IDs. Use when a user wants concise Rhea summaries

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyLow riskHas scriptsGitHub stars of the source repository7.8k

  • Ngs Bulk Rnaseq Counts Qc

    OpenAIOfficial

    Run or plan bulk RNA-seq FASTQ-to-count processing with sample-sheet, strandedness, genome annotation, alignment or pseudoalignment, MultiQC, and count-matrix QC checks.

    Science and researchClaude CodeClaude appsOpenAI Codex+14 more
    Link-onlyGitHub stars of the source repository7.8k